Publications----Center for Excellence in Brain Science and Intelligence Technology

Zhang, Y.#, Song, T.#, Yang, C.#, Shen, Y., Yang, Y., Hu, X. Zhao, R., Wang, W., Wang, X., Liu, H., Yan, H., Jia, C., Liu, Y., Wu, X. Huang, H., Hu, X., Zhou, J., Tan, L., Lau, P., Wang, H., Poo, M., Zhou, P., Bi, G.*, Xiao, Y.*, Liu, C.*, Xu, F.* (2025) Whole-brain reconstruction of fiber tracts based on the cytoarchitectonic organization. Nature Methods :

Hao, S.#, Zhu, X.#, Huang, Z.#, Yang, Q.#, Liu, H.#, Wu, Y.#, Zhan, Y.#, Dong, Y.#, Li, C.#, Wang, H., Haasdijk, E., Wu, Z., Li, S., Yan, H., Zhu, L., Guo, S., Wang, Z., Ye, A., Lin, Y., Cui, L., Tan, X., Liu, H., Wang, M., Chen, J., Zhong, Y., Du, W., Wang, G., Lai, T., Cao, M., Yang, T., Xu, Y., Li, L., Yu, Q., Zhuang, Z., Xia, Y., Lei, Y., An, Y., Cheng, M., Zhao, Y., Han, L., Yuan, Y., Song, X., Song, Y., Gu, L., Liu, C., Lin, X., Wang, R., Wang, Z., Wang, Y., Li, S., Li, H., Song, J., Chen, M., Zhou, W., Yuan, N., Sun, S., Wang, S., Chen, Y., Zheng, M., Fang, J., Zhang, R., Zhang, S., Chai, Q., Liu, J., Wei, W., He, J., Zhou, H., Sun, Y., Liu, Z., Liu, C., Yao, J., Liang, Z., Xu, X., Poo, M., Li, C., De Zeeuw, C.*, Shen, Z.*, Liu, Z.*, Liu, L.*, Liu, S.*, Sun, Y.*, Liu, C.* (2024) Cross-species single-cell spatial transcriptomic atlases of the cerebellar cortex. Science. 385(6716):

Fei, Y.#, Wu, Q.#, Zhao, S.*, Song, K., Han, J.*, Liu, C.* (2024) Diverse and Asymmetric Patterns of Single-Neuron Projectome in Regulating Interhemispheric Connectivity. Nature Communications. 15(1): 3403.

Meng, X.#, Lin, Q.#, Zeng, X.#, Jiang, J., Li, M., Luo, X., Chen, K., Wu, H., Hu, Y., Liu, C.*, Su, B.* (2023) Brain developmental and cortical connectivity changes in the transgenic monkeys carrying the human-specific duplicated gene srGAP2C. National Science Review. :

Zhu, X., Yan, H., Zhan, Y., Feng, F., Wei, C., Yao, Y.*,Liu, C.* (2023) An anatomical and connectivity atlas of the marmoset cerebellum. Cell Rep. 42(5): 112480.

Tian, X.*, Chen, Y., Majka, P., Szczupak, D., Sanz Perl, Y., Chern-Chyi Yen, C., Tong, C., Feng, F., Jiang, H., Glen, D., Deco, G., G. P. Rosa, M.*, C. Silva, A.*, Liang, Z.* & Liu, C.* (2022) An integrated resource for functional and structural connectivity of the marmoset brain. Nat. commun. 13: 7416.

Tian, X., Silva, AC.*, Liu, C.* (2021) The Brain Circuits and Dynamics of Curiosity-Driven Behavior in Naturally Curious Marmosets Cerebral Cortex 00: 1-13

Liu, C., Yen, CC., Szczupak, D., Tian, X., Glen, D., Silva, AC.* (2021) Marmoset Brain Mapping V3: Population multi-modal standard volumetric and surface-based templates. Neuroimage 226: 117620

Liu, C.*, Ye, F., Newman, J., Szczupak, D., Tian, X., Yen, C., Majka, P., Glen, D., Rosa, M., Leopold, D., and Silva, A.* (2020) A resource for the detailed 3D mapping of white matter pathways in the marmoset brain. Nat Neurosci. 23(2): 271–280

Liu, C.*, Yen, C., Szczupak, D., Ye, F., Leopold, D., and Silva, A.* (2019) Anatomical and functional investigation of the marmoset default mode network Nat Commun. 10(1): 1975

Liu, C., Ye, F., Yen, C., Newman, J., Glen, D., Leopold, D., and Silva, A.* (2018) A digital 3D atlas of the marmoset brain based on multi-modal MRI. NeuroImage 169: 106–116

Zhan, Y.*, & Liu, C.* (2025) Cellular Diversity Underpins Cortical Organization and Disease Vulnerability in the Human Brain. Neuroscience bulletin : 10.1007/s12264-025-01512-2.

Zhou Y, Su Y, Yang Q, Li J, Hong Y, Gao T, Zhong Y, Ma X, Jin M, Liu X, Yuan N, Kennedy BC, Wang L, Yan L, Viaene AN, Helbig I, Kessler SK, Kleinman JE, Hyde TM, Nauen DW,Liu C., Liu Z, Shen Z, Li C, Xu S, He J, Weinberger DR, Ming GL, Song H. (2025) Cross-species analysis of adult hippocampal neurogenesis reveals human-specific gene expression but convergent biological processes. Nature Neuroscience. 28(9): 1820-1829.

Li L, Huang Y, Lu D, Fu J, Wu L, Chen Z, Liao H, Zhang J, Li L, Gu T, He F, Liu H, Leng X, Tang J, Yan J, Liu C., Li C, Huang H, Wang L, Liu L, Li C, Poo MM, Li H, Sun Y, Liu Z. (2025) Identification and application of cell-type-specific enhancers for the macaque brain. Cell. 188(16):: 4471-4473.

Lei Y, Liu Y, Wang M, Yuan N, Hou Y, Ding L, Zhu Z, Wu Z, Li C, Zheng M, Zhang R, Ribeiro Gomes AR, Xu Y, Luo Z, Liu Z, Chai Q, Misery P, Zhong Y, Song X, Lamy C, Cui W, Yu Q, Fang J, An Y, Tian Y, Liu Y, Sun X, Wang R, Li H, Song J, Tan X, Wang H, Wang S, Han L, Zhang Y, Li S, Wang K, Wang G, Zhou W, Liu J, Yu C, Zhang S, Chang L, Toplanaj D, Chen M, Liu J, Zhao Y, Ren B, Shi H, Zhang H, Yan H, Ma J, Wang L, Li Y, Zuo Y, Lu L, Gu L, Li S, Wang Y, He Y, Li S, Zhang Q, Lu Y, Dou Y, Liu Y, Zhao A, Zhang M, Zhang X, Xia Y, Zhang W, Cao H, Lu Z, Yu Z, Li X, Wang X, Liang Z, Xu S, Liu, C., Zheng C, Xu C, Liu Z, Li C, Sun YG, Xu X, Dehay C, Vezoli J, Poo MM, Yao J, Liu L, Wei W, Kennedy H, Shen Z. (2025) Single-cell spatial transcriptome atlas and whole-brain connectivity of the macaque claustrum. Cell. 188(14): 3863-3881.e25.

Wu Z, Wang Y, Chen WW, Sun H, Chen X, Li X, Wang Z, Liang W, Wang SY, Luan X, Li Y, Huang S, Liang Y, Zhang J, Chen ZF, Wang G, Gao Y, Liu Y, Wang J, Liu Z, Shi P, Liu C., Lv L, Hou A, Wu C, Yao C, Hong Z, Dai J, Lu Z, Pan F, Chen X, Kettenmann H, Amit I, Speakman JR, Chen Y, Ginhoux F, Cui R, Huang T, Li H. (2025) Peripheral nervous system microglia-like cells regulate neuronal soma size throughout evolution. Cell 188(8): 2159-2174.e15.

Hao, S.#, Zhu, X.#, Huang, Z.#, Yang, Q.#, Liu, H.#, Wu, Y.#, Zhan, Y.#, Dong, Y.#, Li, C.#, Wang, H., Haasdijk, E., Wu, Z., Li, S., Yan, H., Zhu, L., Guo, S., Wang, Z., Ye, A., Lin, Y., Cui, L., Tan, X., Liu, H., Wang, M., Chen, J., Zhong, Y., Du, W., Wang, G., Lai, T., Cao, M., Yang, T., Xu, Y., Li, L., Yu, Q., Zhuang, Z., Xia, Y., Lei, Y., An, Y., Cheng, M., Zhao, Y., Han, L., Yuan, Y., Song, X., Song, Y., Gu, L., Liu, C., Lin, X., Wang, R., Wang, Z., Wang, Y., Li, S., Li, H., Song, J., Chen, M., Zhou, W., Yuan, N., Sun, S., Wang, S., Chen, Y., Zheng, M., Fang, J., Zhang, R., Zhang, S., Chai, Q., Liu, J., Wei, W., He, J., Zhou, H., Sun, Y., Liu, Z., Liu, C., Yao, J., Liang, Z., Xu, X., Poo, M., Li, C., De Zeeuw, C.*, Shen, Z.*, Liu, Z.*, Liu, L.*, Liu, S.*, Sun, Y.*, Liu, C.* (2024) Cross-species single-cell spatial transcriptomic atlases of the cerebellar cortex. Science. 385(6716):

Xia, J., Liu, C., Li, J., Meng, Y., Yang, S., Chen, H.*, Liao, W.* (2024) Decomposing cortical activity through neuronal tracing connectome-eigenmodes in marmosets. Nature Communications. 15(1): 2289.

Ma, G.#, H. Worthy, K.#, Liu, C., G. P. Rosa, M.#, Atapour, N.* (2023) Parvalbumin as a neurochemical marker of the primate optic radiation. iScience. 26(5): 106608.

Zhu, X., Yan, H., Zhan, Y., Feng, F., Wei, C., Yao, Y.*,Liu, C.* (2023) An anatomical and connectivity atlas of the marmoset cerebellum. Cell Rep. 42(5): 112480.

Xiong, Y., Hong, H., Liu, C., Zhang, YQ.* (2022) Social isolation and the brain: effects and mechanisms. Mol Psychiatry : 1-11.

Tong, C., Liu, C., Zhang, K., Bo, B., Xia, Y., Yang, H., Feng, Y.*, Liang, Z.* (2022) Multimodal analysis demonstrating the shaping of functional gradients in the marmoset brain. Nat Commun 13(1): 6584.

Szczupak, D., Iack, PM., Rayêe, D., Liu, C., Lent, R., Tovar-Moll, F., Silva, AC.* (2022) The relevance of heterotopic callosal fibers to interhemispheric connectivity of the mammalian brain. Cereb Cortex : bhac377.

Schaeffer, DJ.*, Klassen, LM., Hori, Y., Tian, X., Szczupak, D., Yen, CC., Cléry, JC., Gilbert, KM., Gati, JS., Menon, RS., Liu, C., Everling, S., Silva, AC. (2022) An open access resource for functional brain connectivity from fully awake marmosets. Neuroimage 252: 119030.

Wang, Q., Zhao, S., He, Z., Zhang, S., Jiang, X., Zhang, T., Liu, T., Liu, C., Han, J.* (2022) Modeling functional difference between gyri and sulci within intrinsic connectivity networks. Cereb Cortex : bhac111.

Toward next-generation primate neuroscience: A collaboration-based strategic plan for integrative neuroimaging. (2022) PRIMatE Data and Resource Exchange (PRIME-DRE) Global Collaboration Workshop and Consortium Neuron 110(1): 16-20.

Zhang, Z., Wang, S., Du, L., Xu, L., Lin, Y., Liu, K., Zou, Y., Bin, Li., Ye, Q., Mao, Y., Chen, W., Zhou, G., Sun, H., Huang, H., Li, R., Li, G., Li, L., Wang, Q., Long, Q., Huang, H., Geng, X., Liu, Y., Liu, C., Li, B.*, Zhou, Z.*, Li, J.*, Wang, J.* (2021) A pilot behavioural and neuroimaging investigation on photothrombotic stroke models in rhesus monkeys. J Neurosci Methods 362: 109291.

Majka, P., Bednarek, S., Chan, JM., Jermakow, N., Liu, C., Saworska, G., Worthy, KH., Silva, AC., Wójcik, DK., Rosa, MGP. (2021) Histology-Based Average Template of the Marmoset Cortex With Probabilistic Localization of Cytoarchitectural Areas. Neuroimage 226: 117625

Schaeffer, DJ., Liu, C., Silva, AC., Everling, S. (2021) Magnetic Resonance Imaging of Marmoset Monkeys. ILAR J. :

Szczupak, D., Iack, PM., Liu, C.; IRC5 Consortium, Tovar-Moll, F., Lent, R., Silva, AC. (2021) Direct Interhemispheric Cortical Communication via Thalamic Commissures: A New White-Matter Pathway in the Rodent Brain Cerebral Cortex :

Szczupak, D., C. Yen, C.Liu, C., Tian, X., Lent, R., T. Moll, F., C. Silva, A.* (2020) Dynamic interhemispheric desynchronization in marmosets and humans with disorders of the corpus callosum. Front Neural Circuits. 14: 612595

Tian, X., Silva, AC.*, Liu, C.* (2021) The Brain Circuits and Dynamics of Curiosity-Driven Behavior in Naturally Curious Marmosets Cerebral Cortex 00: 1-13

Liu, C., Yen, CC., Szczupak, D., Tian, X., Glen, D., Silva, AC.* (2021) Marmoset Brain Mapping V3: Population multi-modal standard volumetric and surface-based templates. Neuroimage 226: 117620

Messinger, A., Sirmpilatze, N., Heuer, K., Loh, KK., Mars, RB., Sein, J., Xu, T., Glen, D., Jung, B., Seidlitz, J., Taylor, P., Toro, R., Garza-Villarreal, EA., Sponheim, C., Wang, X., Benn, RA., Cagna, B., Dadarwal, R., Evrard, HC., Garcia-Saldivar, P., Giavasis, S., Hartig, R., Lepage, C., Liu, C., Majka, P., Merchant, H., Milham, MP., Rosa, MGP., Tasserie, J., Uhrig, L., Margulies, DS., Klink, PC.* (2020) A collaborative resource platform for non-human primate neuroimaging. Neuroimage 226: 117519

Szczupak, D., Liu, C., Yen, C., Choi, S. H., Meireles, F., Victorino, C., IRC5 Consortium, Richards, L., Lent, R., Silva, A. C., and Tovar-Moll, F.* (2020) Long-distance aberrant heterotopic connectivity in a mouse strain with a high incidence of callosal anomalies. NeuroImage 217: 116875

Gao, Z., Guo, X., Liu, C., Mo, Y.*, and Wang, J.* (2020) Right inferior frontal gyrus: An integrative hub in tonal bilinguals. Hum Brain Mapp. 41(8): 2152–2159

Liu, C.*, Yen, C., Szczupak, D., Ye, F., Leopold, D., and Silva, A.* (2019) Anatomical and functional investigation of the marmoset default mode network Nat Commun. 10(1): 1975

Liu, C., Ye, F., Yen, C., Newman, J., Glen, D., Leopold, D., and Silva, A.* (2018) A digital 3D atlas of the marmoset brain based on multi-modal MRI. NeuroImage 169: 106–116

Zhang, Y., Fan, L., Caspers, S., Heim, S., Song, M., Liu, C., Mo, Y., Eickhoff, S., Amunts, K., and Jiang, T.* (2017) Cross-cultural consistency and diversity in intrinsic functional organization of Broca's Region. NeuroImage 150: 177–190

Wu, X., Zhao, N., Bai, F., Li, C., Liu, C., Wei, J., Zong, W., Yang, L., Ryabinin, A., Ma, Y., and Wang, J.* (2016) Morphine-induced conditioned place preference in rhesus monkeys: Resistance to inactivation of insula and extinction. Neurobiol Learn Mem. 131: 192–200

Zhang, Y., Caspers, S., Fan, L., Fan, Y., Song, M., Liu, C., Mo, Y., Roski, C., Eickhoff, S., Amunts, K., and Jiang, T.* (2015) Robust brain parcellation using sparse representation on resting-state fMRI Brain Struct Funct. 220(6): 3565–3579

Liu, C., and Tian, X.* (2014) A data-driven method to reduce the impact of region size on degree metrics in voxel-wise functional brain networks. Front Neurol. 5: 199

Mo, Y., Chao, F., Song, M., Liu, C., Liu, H. L., Qian, X. Y., and Zhao, X. D.* (2014) Parameter comparison of white matter diffusion tensor imaging (DTI) in rhesus macaques (Macaca mulatta). Zool. Res. 35(3): 182–185

Hu, Y., Jiang, H., Liu, C., Wang, J., Yu, C., Carlson, S., Yang, S., Saarinen, V., Rizak, J., Tian, X., Tan, H., Chen, Z., Ma, Y., and Hu, X.* (2013) What interests them in the pictures--differences in eye-tracking between rhesus monkeys and humans. Neurosci Bull. 29(5): 553–564

Tian, X.#, Liu, C.#, Jiang, T., Rizak, J., Ma, Y., and Hu, X.* (2013) Feature-reduction and semi-simulated data in functional connectivity-based cortical parcellation. Neurosci Bull. 29(3): 333–347

Wang, J.*, Wu, X., Li, C., Wei, J., Jiang, H., Liu, C., Yu, C., Carlson, S., Hu, X., Ma, H., Duan, W., and Ma, Y.* (2012) Effect of morphine on conditioned place preference in rhesus monkeys. Addict Biol. 17(3): 539–546

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LIU Cirong

LIU Cirong